| 1 | Trevor CahillRHP, 1BVista | 109 | 297 | 66.2 | 30 |
| 2 | Mitchell WygantP, OFFCHS (El Cajon) | 94 | 259 | 54.2 | 18 |
| 3 | A.J. GriffinP, 3BGrossmont (El Cajon) | 91 | 291 | 72.0 | 27 |
| 4 | Guido KnudsonSS, RHPBVHS (Chula Vista) | 86 | 290 | 68.0 | 29 |
| 5 | McCullough DeanRHPVista | 84 | 280 | 71.0 | 15 |
| 6 | Russell HavensImperial | 73 | 258 | 60.0 | 21 |
| 7 | Bradley ProcopioRHPMontgomery (San Diego) | 72 | 351 | 82.1 | 17 |
| 8 | Gerald CasanadaP, INFMHHS (San Marcos) | 70 | 289 | 73.2 | 30 |
| 9 | Irwin DelgadoLHP, CFBrawley | 69 | 257 | 56.0 | 18 |
| 10 | Travis WilcoxSS, PSouthwest EC (El Centro) | 67 | 235 | 57.2 | 23 |
| 11 | Reid SuitorPTorrey Pines (San Diego) | 66 | 357 | 85.2 | 15 |
| 12 | Deryk HookerRHP, 1BMira Mesa (San Diego) | 65 | 222 | 58.0 | 31 |
| 13 | Clint HusseyP, 1BSouthwest EC (El Centro) | 62 | 214 | 56.0 | 20 |
| 14 | Marcus HatleyP, OFMHHS (San Marcos) | 59 | 231 | 53.0 | 33 |
| 15 | Greg Wisenberg3B, RHPLJCD (La Jolla) | 57 | 315 | 70.0 | 27 |
| 16 | Zack KusnirLHP, 1BLJCD (La Jolla) | 57 | 253 | 57.2 | 29 |
| 17 | Billy LehmanP, OFHoltville | 56 | 277 | 58.1 | 19 |
| 18 | Tyson TaylorRHPScripps Ranch (San Diego) | 56 | 336 | 76.0 | 20 |
| 19 | Anthony WestendorfRHP, OFMVHS (Imperial Beach) | 55 | 275 | 59.1 | 26 |
| 20 | Adam PackardPSDA (Encinitas) | 54 | 256 | 53.0 | 12 |
| 21 | Dominic BowenP, OFHilltop (Chula Vista) | 53 | 187 | 44.0 | 25 |
| 22 | Alex CastanedaP, OFOceanside | 53 | 290 | 65.1 | 30 |
| 23 | Dorsey Ek1B, PFPHS (San Diego) | 50 | 300 | 71.0 | 31 |
| 24 | James BoernerImperial | 49 | 132 | 33.0 | 12 |
| 25 | Josh AndersonRHP, 3BVCA (Chula Vista) | 49 | 222 | 51.2 | 16 |
| 26 | Ty BradleyINF, RHPSFCHS (Solana Beach) | 49 | 256 | 62.1 | 30 |
| 27 | Mike GriffinRHP, DHRBHS (San Diego) | 48 | 273 | 60.1 | 12 |
| 28 | Eric HillenbrandOF, PTorrey Pines (San Diego) | 48 | 212 | 50.0 | 34 |
| 29 | Daniel GieseP, 1BTCCHS (Vista) | 47 | 161 | 33.1 | 23 |
| 30 | Robert RehbergerRHP, INFSFCHS (Solana Beach) | 47 | 281 | 66.0 | 29 |
| 31 | Roberto RodriquezLHP, 1BPoint Loma (San Diego) | 46 | 282 | 63.0 | 25 |
| 32 | Taylor WohlwendPGrossmont (El Cajon) | 45 | 175 | 39.1 | 16 |
| 33 | James KangSS, POVHS (Huntington Beach) | 45 | 297 | 66.1 | 26 |
| 34 | Matt VeltmannPCCHS (San Diego) | 44 | 3 | 53.2 | 14 |
| 35 | Brett Miller3B, RHPMontgomery (San Diego) | 44 | 176 | 43.2 | 26 |
| 36 | Chris TuckerRHP, UTILMEHS (Pine Valley) | 44 | 256 | 56.1 | 24 |
| 37 | Hunter HerreraP, 2BPoint Loma (San Diego) | 44 | 319 | 67.2 | 15 |
| 38 | Zach Shipley1B, PFCHS (El Cajon) | 43 | 166 | 35.1 | 19 |
| 39 | Tyler MabryPFPHS (San Diego) | 42 | 283 | 64.0 | 15 |
| 40 | Auggie RichardsonLHP, DHVista | 41 | 200 | 47.0 | 26 |
| 41 | Robert BirdsongLHP, 1BPVVHS (Blythe) | 41 | 134 | 34.1 | 16 |
| 42 | Chip TenglerP, 1BMonte Vista (Danville) | 41 | 159 | 44.1 | 23 |
| 43 | Manuel De La CruzLHP, OFCentral (El Centro) | 40 | 97 | 24.0 | 7 |
| 44 | Robert SpicerRHP, 1BMontgomery (San Diego) | 39 | 206 | 47.1 | 27 |
| 45 | Parker BushOF, LHPSDJA (San Diego) | 39 | 194 | 39.2 | 11 |
| 46 | Mike CassadyPMonte Vista (Danville) | 39 | 232 | 60.2 | 12 |
| 47 | Robert UnderwoodC, PKearny (San Diego) | 39 | 209 | 43.2 | 27 |
| 48 | Andrew HaysP, OFSan Marcos | 39 | 222 | 41.2 | 26 |
| 49 | Garret BoyerP, SSEC (Escondido) | 39 | 128 | 26.2 | 15 |
| 50 | Billy BrightP, OFLa Jolla | 39 | 230 | 56.1 | 24 |
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