| 1 | Michael FaganLHP, OFSDJA (San Diego) | 140 | 295 | 73.0 | 20 |
| 2 | Andrew MacMahonRHP, SSEC (Escondido) | 105 | 286 | 63.2 | 24 |
| 3 | Bryan CrabbRHPCoronado | 104 | 279 | 66.1 | 28 |
| 4 | Ryan WilkinsP, 3BCCHS (San Diego) | 99 | 0 | 66.0 | 32 |
| 5 | Christian JonesP, 1BMonte Vista (Danville) | 98 | 0 | 66.0 | 24 |
| 6 | Josh ElmsRHP, UTILMEHS (Pine Valley) | 96 | 294 | 66.1 | 23 |
| 7 | Willie HeienP, SSVCA (Chula Vista) | 95 | 184 | 44.2 | 20 |
| 8 | Levi StevensP, 1BGrossmont (El Cajon) | 93 | 309 | 75.1 | 34 |
| 9 | Kyle CoutureCoronado | 92 | 291 | 67.1 | 28 |
| 10 | Cody WillinghamPRamona | 87 | 373 | 77.0 | 15 |
| 11 | Garrett HughesP, 1BLCCHS (Carlsbad) | 87 | 268 | 66.2 | 33 |
| 12 | Abraham TorresRHP, 2BMontgomery (San Diego) | 86 | 314 | 82.1 | 31 |
| 13 | Nathan SaquilonP, 1BHCA (San Diego) | 85 | 329 | 72.2 | 32 |
| 14 | Nolan GannonP, 1BSFCHS (Solana Beach) | 83 | 252 | 62.1 | 29 |
| 15 | Keegan YuhlPPoway | 83 | 314 | 75.1 | 19 |
| 16 | Max MacNabbP, OFLCCHS (Carlsbad) | 81 | 217 | 55.0 | 14 |
| 17 | Cody CrawfordP, 3BSan Diego | 80 | 278 | 76.1 | 25 |
| 18 | Joey DenatoOF, LHPTorrey Pines (San Diego) | 79 | 266 | 60.1 | 32 |
| 19 | Cody PoteetChristian (El Cajon) | 78 | 309 | 71.2 | 32 |
| 20 | Patrick ChristensenP, 1BLa Jolla | 76 | 306 | 71.2 | 25 |
| 21 | Aaron GriffinP, OFGrossmont (El Cajon) | 75 | 278 | 65.1 | 26 |
| 22 | Kendall LindleyOF, PFPHS (San Diego) | 69 | 316 | 70.0 | 28 |
| 23 | Martian SanchezP, COVCHS (San Diego) | 69 | 210 | 47.1 | 17 |
| 24 | Trevor WilliamsRHP, DHRBHS (San Diego) | 68 | 310 | 73.0 | 32 |
| 25 | Agustin LopezRHP, 1BMontgomery (San Diego) | 68 | 312 | 77.0 | 33 |
| 26 | Jonathan MeyerP, 1BCCHS (San Diego) | 65 | 0 | 65.2 | 17 |
| 27 | Phillip Jr, WalbyRHP, 2BScripps Ranch (San Diego) | 65 | 251 | 63.1 | 30 |
| 28 | Efren OlivasSS, PClairemont (San Diego) | 63 | 276 | 62.5 | 29 |
| 29 | Jonas NoackP, 3BUCHS (San Diego) | 63 | 277 | 63.0 | 30 |
| 30 | Erik WeatherfordP, 1BMCHS (San Diego) | 62 | 274 | 58.1 | 21 |
| 31 | Devon RodriguesC, PHTCV (Chula Vista) | 61 | 0 | 44.2 | 18 |
| 32 | Steven SwiftP, OFMonte Vista (Danville) | 60 | 0 | 48.2 | 24 |
| 33 | Michael StudleyINF, PRamona | 59 | 258 | 56.2 | 28 |
| 34 | Daniel RosenRHP, CHoover (San Diego) | 59 | 336 | 61.2 | 25 |
| 35 | Andrew BellattiP, 1BSCHS (Spring Valley) | 59 | 18 | 54.0 | 26 |
| 36 | Tommy WorthP, 3BJulian | 59 | 0 | 68.0 | 20 |
| 37 | Justin LawrenceOFValley Center | 57 | 290 | 66.2 | 26 |
| 38 | Troy SmithLHP, 1BBVHS (Chula Vista) | 57 | 269 | 62.0 | 31 |
| 39 | Juan HernadezSS, PBorrego Springs | 57 | 0 | 32.1 | 16 |
| 40 | Chris LindquistUTIL, PBorrego Springs | 57 | 0 | 47.0 | 18 |
| 41 | Jonny HoffmanP, OFEl Camino (Oceanside) | 56 | 187 | 49.2 | 17 |
| 42 | Miguel SilvaRHP, SSHilltop (Chula Vista) | 56 | 254 | 59.0 | 19 |
| 43 | Nathan WilliamsRHP, 1BScripps Ranch (San Diego) | 54 | 272 | 59.2 | 32 |
| 44 | Esau MadrigalLHP, UTILCalexico | 54 | 198 | 45.0 | 24 |
| 45 | Christian RosalesP, INFVMHS (Calexico) | 54 | 33 | 32.0 | 9 |
| 46 | Joseph Altig1B, POVCHS (San Diego) | 53 | 113 | 32.2 | 17 |
| 47 | Austin MuehringRHP, UTILRBHS (San Diego) | 52 | 300 | 67.0 | 35 |
| 48 | Jose RodriguezP, INFRBVHS (Vista) | 52 | 270 | 63.2 | 35 |
| 49 | Travis WilcoxP, SSSouthwest EC (El Centro) | 51 | 170 | 42.0 | 21 |
| 50 | Dyllan WhiteRHP, UTILMEHS (Pine Valley) | 51 | 223 | 44.1 | 23 |
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