| 1 | Will FiacchiQBMarcellus | 2404 | 267.1 | 124 | 236 | 0.525 | 22 | 7 | 107 | 9 |
| 2 | Rian WhiteQBWarwick | 2385 | 238.5 | 159 | 252 | 0.631 | 31 | 6 | 124 | 10 |
| 3 | Ryan McLaughlinQB, SSAMHS (Bardonia) | 2113 | 234.8 | 104 | 175 | 0.594 | 19 | 7 | 121 | 9 |
| 4 | David CampeseQBBGHS (East Syracuse) | 2012 | 223.6 | 133 | 258 | 0.516 | 17 | 8 | 87 | 9 |
| 5 | Travis EmanQBCanisius (Buffalo) | 1782 | 178.2 | 77 | 154 | 0.500 | 13 | 8 | 98 | 10 |
| 6 | Aaron KilnerQB, LBO'Neill (Highland Falls) | 1701 | 154.6 | 91 | 200 | 0.455 | 11 | 12 | 69 | 11 |
| 7 | Ryan SmithQBGHS (Guilderland Center) | 1649 | 183.2 | 135 | 240 | 0.562 | 16 | 8 | 86 | 9 |
| 8 | Tyler HeuerQB, QBOceanside | 1578 | 175.3 | 121 | 174 | 0.695 | 21 | 6 | 123 | 9 |
| 9 | Brad BellingerDBSouthside (Elmira) | 1577 | 175.2 | 111 | 230 | 0.483 | 12 | 11 | 68 | 9 |
| 10 | Adam GoltcheQB, SGNNHS (Great Neck) | 1537 | 170.8 | 82 | 148 | 0.554 | 16 | 8 | 105 | 9 |
| 11 | Kyle ParmenterQB, FSCambridge | 1489 | 165.4 | 82 | 173 | 0.474 | 18 | 10 | 88 | 9 |
| 12 | Manny MaglioccoQBAI (Rochester) | 1459 | 132.6 | 92 | 132 | 0.697 | 20 | 5 | 130 | 11 |
| 13 | Jordan PaulQB, DBNew Utrecht (Brooklyn) | 1369 | 136.9 | 95 | 161 | 0.590 | 15 | 4 | 107 | 10 |
| 14 | Dan SmithQB, DEWestmoreland | 1301 | 118.3 | 70 | 128 | 0.547 | 15 | 6 | 110 | 11 |
| 15 | Sheldon AllenQB, DBMCHS (CO-OP) (Rochester) | 1259 | 157.4 | 79 | 148 | 0.534 | 9 | 7 | 83 | 8 |
| 16 | Jahleel FenelonQB, FSLafayette (Brooklyn) | 1258 | 139.8 | 83 | 146 | 0.568 | 3 | 9 | 67 | 9 |
| 17 | Tyler LawlorQB, DBCCHS (New Windsor) | 1238 | 112.5 | 81 | 164 | 0.494 | 11 | 12 | 67 | 11 |
| 18 | Dan BroeQB, DBOneonta | 1235 | 137.2 | 71 | 155 | 0.458 | 9 | 12 | 61 | 9 |
| 19 | Peter CrisaraQB, FSIrvington | 1232 | 154.0 | 79 | 169 | 0.467 | 11 | 11 | 66 | 8 |
| 20 | Maurice EdwardsQB, CBA-Tech (Brooklyn) | 1223 | 111.2 | 46 | 76 | 0.605 | 15 | 3 | 128 | 11 |
| 21 | Jake MeekQB, SBKHS (Rochester) | 1213 | 202.2 | 59 | 105 | 0.562 | 17 | 4 | 121 | 6 |
| 22 | John VincentQB, FSWilson | 1201 | 133.4 | 81 | 166 | 0.488 | 11 | 7 | 77 | 9 |
| 23 | Donavan WalkerQB, LBRoosevelt (Yonkers) | 1178 | 117.8 | 76 | 138 | 0.551 | 11 | 5 | 95 | 10 |
| 24 | James StantonQB, FSAvon | 1176 | 117.6 | 65 | 100 | 0.650 | 14 | 4 | 128 | 10 |
| 25 | Tyrell GoodmanQB, SASHS (White Plains) | 1169 | 116.9 | 73 | 129 | 0.566 | 14 | 9 | 94 | 10 |
| 26 | Steven FerreiraSayville | 1168 | 146.0 | 82 | 112 | 0.732 | 10 | 4 | 121 | 8 |
| 27 | Adam BironQBJohnstown | 1155 | 144.4 | 101 | 208 | 0.486 | 14 | 6 | 76 | 8 |
| 28 | Mirjan PopovicQBNew Dorp (Staten Island) | 1144 | 127.1 | 70 | 143 | 0.490 | 11 | 11 | 70 | 9 |
| 29 | Ricky RuffoCVHS (Binghamton) | 1102 | 122.4 | 69 | 124 | 0.556 | 10 | 10 | 79 | 9 |
| 30 | Marty SoucyQB, DBWayne (Ontario Center) | 1101 | 137.6 | 76 | 165 | 0.461 | 7 | 10 | 57 | 8 |
| 31 | Wayne BonsellQBBinghamton | 1085 | 120.6 | 82 | 163 | 0.503 | 13 | 6 | 83 | 9 |
| 32 | Jesse HuntFox Lane (Bedford) | 1079 | 154.1 | 71 | 127 | 0.559 | 12 | 0 | 116 | 7 |
| 33 | Michael MooreQB, FSBay Shore | 1066 | 118.4 | 72 | 146 | 0.493 | 14 | 6 | 88 | 9 |
| 34 | Dean MarloweQB, DBHoly Cross (Flushing) | 1062 | 106.2 | 73 | 111 | 0.658 | 12 | 3 | 122 | 10 |
| 35 | Frank LainoQBFort Hamilton (Brooklyn) | 1062 | 88.5 | 59 | 88 | 0.670 | 15 | 2 | 138 | 12 |
| 36 | Greg RandoQBXaverian (Brooklyn) | 1060 | 117.8 | 105 | 184 | 0.571 | 11 | 10 | 71 | 9 |
| 37 | Jeremy RodriguezQB, DBOneida | 1058 | 117.6 | 60 | 158 | 0.380 | 11 | 10 | 58 | 9 |
| 38 | Sal CucciaQBKHS (Wappingers Falls) | 1041 | 115.7 | 63 | 106 | 0.594 | 11 | 1 | 123 | 9 |
| 39 | Lemar JohnsonQB, DBOssining | 1041 | 115.7 | 62 | 114 | 0.544 | 10 | 5 | 96 | 9 |
| 40 | Michael WalkerQB, FSSouth Bronx (Bronx) | 1036 | 86.3 | 44 | 85 | 0.518 | 21 | 5 | 111 | 12 |
| 41 | Jamie KaltnerBHS (Briarcliff Manor) | 1021 | 127.6 | 72 | 123 | 0.585 | 10 | 15 | 73 | 8 |
| 42 | Talib BarksdaleQBHudson Falls | 1014 | 126.8 | 42 | 88 | 0.477 | 10 | 2 | 118 | 8 |
| 43 | Bryan HenryEldred | 1011 | 91.9 | 53 | 73 | 0.726 | 3 | 0 | 128 | 11 |
| 44 | Richie ChuteQBVictor | 985 | 109.4 | 75 | 147 | 0.510 | 9 | 4 | 82 | 9 |
| 45 | Asa JohnsonQB, DBFrewsburg | 976 | 122.0 | 65 | 140 | 0.464 | 9 | 5 | 76 | 8 |
| 46 | Garrett HoagQB, DBDansville | 968 | 107.6 | 88 | 177 | 0.497 | 3 | 10 | 48 | 9 |
| 47 | Juan (johnny) CruzQBBeacon | 965 | 120.6 | 76 | 177 | 0.429 | 0 | 0 | 61 | 8 |
| 48 | Jarrid WilliamsQBPoughkeepsie | 951 | 118.9 | 54 | 121 | 0.446 | 4 | 6 | 62 | 8 |
| 49 | Nolan RobinsonQB, LBPleasantville | 950 | 135.7 | 43 | 93 | 0.462 | 12 | 2 | 114 | 7 |
| 50 | Scott GortonQB, DBGreene | 947 | 105.2 | 56 | 135 | 0.415 | 15 | 10 | 72 | 9 |