| 1 | Quincy Robinson1B, OFHCA (San Diego) | 1.000 | 158 | 12 | 0 | 170 | 23 |
| 2 | David CarrollCVista | 0.994 | 163 | 9 | 1 | 173 | 28 |
| 3 | Chris JaimeCMadison (San Diego) | 0.992 | 234 | 23 | 2 | 259 | 26 |
| 4 | Lance McCormickP, 1BMadison (San Diego) | 0.992 | 55 | 73 | 1 | 129 | 26 |
| 5 | Brandon Meredith1B, DHMontgomery (San Diego) | 0.991 | 110 | 1 | 1 | 112 | 20 |
| 6 | Josh PowersINF, PHCA (San Diego) | 0.990 | 164 | 34 | 2 | 200 | 25 |
| 7 | Aaron HallC, OFMontgomery (San Diego) | 0.988 | 135 | 31 | 2 | 168 | 32 |
| 8 | Lukas Smith3B, CTCCHS (Vista) | 0.988 | 74 | 8 | 1 | 83 | 21 |
| 9 | Ricardo PecinaP, 1BMadison (San Diego) | 0.987 | 112 | 115 | 3 | 230 | 26 |
| 10 | Matt Passanisi1B, PGrossmont (El Cajon) | 0.987 | 70 | 5 | 1 | 76 | 10 |
| 11 | Brent PlanckSS, 2BMadison (San Diego) | 0.987 | 34 | 40 | 1 | 75 | 25 |
| 12 | Andy Aiello1BEl Camino (Oceanside) | 0.986 | 203 | 12 | 3 | 218 | 29 |
| 13 | Ryan VandewieleP, 1BOceanside | 0.985 | 105 | 25 | 2 | 132 | 32 |
| 14 | Johnny JimenezSS, 2BOceanside | 0.985 | 27 | 39 | 1 | 67 | 17 |
| 15 | Daniel BodemerCSFCHS (Solana Beach) | 0.983 | 153 | 24 | 3 | 180 | 27 |
| 16 | Max Peterson1B, PWestview (San Diego) | 0.983 | 156 | 13 | 3 | 172 | 28 |
| 17 | Daniel Moreno2B, SSMadison (San Diego) | 0.978 | 29 | 60 | 2 | 91 | 26 |
| 18 | Jimbo Newman1B, PCrawford (San Diego) | 0.977 | 166 | 6 | 4 | 176 | 24 |
| 19 | Dante LoveC, PCrawford (San Diego) | 0.976 | 26 | 57 | 2 | 85 | 23 |
| 20 | Jeff DowINFSFCHS (Solana Beach) | 0.975 | 153 | 6 | 4 | 163 | 22 |
| 21 | Nima Eftekhary1BLJCD (La Jolla) | 0.974 | 172 | 15 | 5 | 192 | 26 |
| 22 | Jeff FronekCLJCD (La Jolla) | 0.972 | 97 | 9 | 3 | 109 | 27 |
| 23 | Matt WiegandP, 1BLa Jolla | 0.972 | 66 | 4 | 2 | 72 | 26 |
| 24 | Jerrell JacobsSS, PCrawford (San Diego) | 0.971 | 43 | 56 | 3 | 102 | 24 |
| 25 | Danny PieczynskiCGrossmont (El Cajon) | 0.971 | 62 | 6 | 2 | 70 | 8 |
| 26 | Tom Cox1BScripps Ranch (San Diego) | 0.968 | 141 | 12 | 5 | 158 | 25 |
| 27 | Brian Rantael2BWestview (San Diego) | 0.967 | 58 | 60 | 4 | 122 | 28 |
| 28 | Joey FandelOF, POceanside | 0.965 | 71 | 12 | 3 | 86 | 33 |
| 29 | Andrew CastanedaP, 1BOceanside | 0.964 | 175 | 12 | 7 | 194 | 33 |
| 30 | Robert Spicer1B, PMontgomery (San Diego) | 0.963 | 89 | 16 | 4 | 109 | 32 |
| 31 | Michael SalehP, 2BLJCD (La Jolla) | 0.963 | 23 | 55 | 3 | 81 | 27 |
| 32 | Matt Baker1B, CMVHS (Imperial Beach) | 0.962 | 66 | 10 | 3 | 79 | 24 |
| 33 | Travis McClearySSMEHS (Pine Valley) | 0.958 | 46 | 46 | 4 | 96 | 21 |
| 34 | Nick McCoyCWestview (San Diego) | 0.958 | 87 | 4 | 4 | 95 | 25 |
| 35 | Matt Landes1BVista | 0.950 | 101 | 13 | 6 | 120 | 25 |
| 36 | Brian KolbINF, PSFCHS (Solana Beach) | 0.950 | 39 | 57 | 5 | 101 | 24 |
| 37 | Erik ContrerasINFMorse (San Diego) | 0.948 | 32 | 60 | 5 | 97 | 23 |
| 38 | John LeeC, INFHigh Tech SD (San Diego) | 0.947 | 59 | 12 | 4 | 75 | 11 |
| 39 | Zach Shipley1B, CFFCHS (El Cajon) | 0.944 | 59 | 9 | 4 | 72 | 18 |
| 40 | Brian Moy3BVista | 0.942 | 61 | 4 | 4 | 69 | 19 |
| 41 | Daniel GieseP, 1BTCCHS (Vista) | 0.942 | 58 | 7 | 4 | 69 | 21 |
| 42 | Matt Cerda2B, SSOceanside | 0.940 | 47 | 62 | 7 | 116 | 33 |
| 43 | Steven AlexanderINF, PSFCHS (Solana Beach) | 0.940 | 26 | 52 | 5 | 83 | 25 |
| 44 | Francisco Rios2B, OFMontgomery (San Diego) | 0.940 | 27 | 36 | 4 | 67 | 19 |
| 45 | Donte WrightRF, PCrawford (San Diego) | 0.939 | 63 | 29 | 6 | 98 | 24 |
| 46 | Jedon MatthewsOF, PHCA (San Diego) | 0.937 | 35 | 54 | 6 | 95 | 25 |
| 47 | Edgar MolinaRFMontgomery (San Diego) | 0.936 | 71 | 2 | 5 | 78 | 31 |
| 48 | Tim AchesonP, 1BMorse (San Diego) | 0.935 | 117 | 27 | 10 | 154 | 25 |
| 49 | Drew WindremSS, 3BFCHS (El Cajon) | 0.935 | 107 | 23 | 9 | 139 | 18 |
| 50 | Chris RobbinsC, 2BFCHS (El Cajon) | 0.932 | 57 | 12 | 5 | 74 | 15 |