| 1 | Derek BaroodyC, PHammondsport | 0.519 | 65 | 27 | 52 | 5 | 0 | 0 | 16 |
| 2 | Mike PrattINF, PNotre Dame (Batavia) | 0.469 | 98 | 38 | 81 | 6 | 9 | 0 | 25 |
| 3 | Anton Zyla2BHammondsport | 0.458 | 63 | 22 | 48 | 6 | 0 | 0 | 16 |
| 4 | Corey UprightRHP, 3BAvon | 0.457 | 67 | 21 | 46 | 5 | 0 | 1 | 18 |
| 5 | Justyn SchuckLF, 2BHammondsport | 0.431 | 71 | 25 | 58 | 5 | 1 | 0 | 16 |
| 6 | Brandon GrantP, 3BWilson Magnet (Rochester) | 0.410 | 93 | 32 | 78 | 4 | 3 | 3 | 22 |
| 7 | Jay LopezCF, PWilson Magnet (Rochester) | 0.408 | 94 | 31 | 76 | 3 | 7 | 0 | 22 |
| 8 | Luke Fairbrother1BHammondsport | 0.404 | 60 | 21 | 52 | 5 | 1 | 0 | 16 |
| 9 | Tyler KochOF, PDansville | 0.397 | 86 | 29 | 73 | 7 | 1 | 0 | 21 |
| 10 | Chris CavanaughSS, OFNotre Dame (Batavia) | 0.395 | 93 | 34 | 86 | 3 | 3 | 1 | 24 |
| 11 | Herman Castleberry3B, PWilson Magnet (Rochester) | 0.395 | 88 | 30 | 76 | 9 | 6 | 0 | 22 |
| 12 | Chris Ripley1B, 3BNotre Dame (Batavia) | 0.378 | 91 | 31 | 82 | 2 | 3 | 2 | 26 |
| 13 | Will BaileyCF, PHammondsport | 0.370 | 67 | 20 | 54 | 2 | 3 | 1 | 16 |
| 14 | Curtis BennettC, OFDansville | 0.357 | 65 | 20 | 56 | 1 | 0 | 0 | 21 |
| 15 | Daniel BanachRHP, 2BAvon | 0.352 | 81 | 25 | 71 | 9 | 1 | 0 | 21 |
| 16 | Rick LairC, PNotre Dame (Batavia) | 0.345 | 92 | 29 | 84 | 10 | 0 | 1 | 26 |
| 17 | Jake LawrenceOF, PDansville | 0.343 | 77 | 23 | 67 | 2 | 2 | 0 | 21 |
| 18 | Matt Phillips1BAvon | 0.338 | 83 | 24 | 71 | 4 | 0 | 0 | 21 |
| 19 | Steve BartonCDansville | 0.333 | 83 | 23 | 69 | 3 | 0 | 0 | 21 |
| 20 | Ashton JockRHP, 3BAvon | 0.333 | 71 | 20 | 60 | 3 | 0 | 0 | 20 |
| 21 | Ricci Wendlandt3B, CHammondsport | 0.327 | 61 | 18 | 55 | 4 | 0 | 0 | 16 |
| 22 | Ryan HouseRF, PHammondsport | 0.324 | 38 | 11 | 34 | 1 | 1 | 0 | 12 |
| 23 | Thomas Wolcott2BAvon | 0.323 | 79 | 21 | 65 | 1 | 0 | 0 | 23 |
| 24 | Jake ClarksonP, OFHammondsport | 0.314 | 57 | 16 | 51 | 6 | 1 | 0 | 15 |
| 25 | Kevin SesslerC, PWaterloo | 0.314 | 40 | 11 | 35 | 1 | 0 | 0 | 12 |
| 26 | Kyle SchusterINF, PDansville | 0.312 | 71 | 20 | 64 | 4 | 2 | 0 | 20 |
| 27 | Garrett KeselRHP, SSAvon | 0.304 | 86 | 24 | 79 | 4 | 1 | 5 | 22 |
| 28 | Delano TaylorC, 1BWilson Magnet (Rochester) | 0.304 | 55 | 14 | 46 | 1 | 0 | 0 | 19 |
| 29 | Nick WetherwaxC, 3BNotre Dame (Batavia) | 0.304 | 30 | 7 | 23 | 1 | 0 | 0 | 14 |
| 30 | Garrett HoagP, INFDansville | 0.302 | 76 | 19 | 63 | 7 | 0 | 1 | 21 |
| 31 | John HouselRHP, 3BAvon | 0.302 | 63 | 16 | 53 | 6 | 1 | 0 | 18 |
| 32 | Greg BarrOFNotre Dame (Batavia) | 0.294 | 41 | 10 | 34 | 1 | 1 | 0 | 19 |
| 33 | Henry Jones1B, PWilson Magnet (Rochester) | 0.288 | 89 | 23 | 80 | 2 | 0 | 0 | 22 |
| 34 | Kevin SchildwasterCF, INFNotre Dame (Batavia) | 0.273 | 89 | 21 | 77 | 4 | 1 | 1 | 25 |
| 35 | Kevin Francis2B, PNotre Dame (Batavia) | 0.269 | 89 | 21 | 78 | 1 | 2 | 0 | 26 |
| 36 | Matt CeravoloLFWilson Magnet (Rochester) | 0.269 | 72 | 14 | 52 | 1 | 0 | 0 | 21 |
| 37 | Jordan YellsP, SSWaterloo | 0.265 | 40 | 9 | 34 | 3 | 2 | 0 | 12 |
| 38 | Patrick Hayes3B, CFAvon | 0.263 | 24 | 5 | 19 | 0 | 0 | 0 | 10 |
| 39 | Chris Hilkert3B, PWaterloo | 0.261 | 29 | 6 | 23 | 1 | 0 | 0 | 9 |
| 40 | Max BarrettCAvon | 0.257 | 37 | 9 | 35 | 0 | 2 | 0 | 18 |
| 41 | Jeremy DobnerRF, 1BWilson Magnet (Rochester) | 0.250 | 73 | 15 | 60 | 4 | 1 | 0 | 20 |
| 42 | Charlie PassarellCFAvon | 0.250 | 66 | 14 | 56 | 0 | 0 | 0 | 18 |
| 43 | Justin LathropOF, PDansville | 0.250 | 65 | 14 | 56 | 1 | 1 | 0 | 20 |
| 44 | Kris French1BWaterloo | 0.250 | 40 | 9 | 36 | 1 | 0 | 1 | 12 |
| 45 | Norton SudaC, PWilson Magnet (Rochester) | 0.246 | 83 | 16 | 65 | 2 | 0 | 0 | 22 |
| 46 | Bryan Jackson1B, PDansville | 0.246 | 80 | 16 | 65 | 2 | 4 | 1 | 21 |
| 47 | Desmond BrooksSS, 2BWilson Magnet (Rochester) | 0.240 | 92 | 18 | 75 | 2 | 0 | 1 | 22 |
| 48 | Joe PawlakOF, PNotre Dame (Batavia) | 0.235 | 66 | 12 | 51 | 1 | 0 | 0 | 26 |
| 49 | Pat MancusoP, 1BNotre Dame (Batavia) | 0.234 | 91 | 18 | 77 | 4 | 0 | 0 | 26 |
| 50 | Cody FarrOFWaterloo | 0.217 | 29 | 5 | 23 | 0 | 0 | 0 | 12 |