| 1 | Corey UprightRHP, 3BAvon | 0.597 | 67 | 21 | 46 | 15 | 2 | 4 | 18 |
| 2 | Derek BaroodyC, PHammondsport | 0.571 | 65 | 27 | 52 | 9 | 2 | 0 | 16 |
| 3 | Anton Zyla2BHammondsport | 0.565 | 63 | 22 | 48 | 11 | 1 | 2 | 16 |
| 4 | Mike PrattINF, PNotre Dame (Batavia) | 0.541 | 98 | 38 | 81 | 12 | 2 | 3 | 25 |
| 5 | Justyn SchuckLF, 2BHammondsport | 0.521 | 71 | 25 | 58 | 12 | 1 | 0 | 16 |
| 6 | Jay LopezCF, PWilson Magnet (Rochester) | 0.511 | 94 | 31 | 76 | 16 | 1 | 1 | 22 |
| 7 | Tyler KochOF, PDansville | 0.488 | 86 | 29 | 73 | 11 | 0 | 2 | 21 |
| 8 | Brandon GrantP, 3BWilson Magnet (Rochester) | 0.484 | 93 | 32 | 78 | 10 | 2 | 3 | 22 |
| 9 | Will BaileyCF, PHammondsport | 0.478 | 67 | 20 | 54 | 11 | 1 | 1 | 16 |
| 10 | Nick WetherwaxC, 3BNotre Dame (Batavia) | 0.467 | 30 | 7 | 23 | 5 | 0 | 2 | 14 |
| 11 | Herman Castleberry3B, PWilson Magnet (Rochester) | 0.466 | 88 | 30 | 76 | 8 | 1 | 3 | 22 |
| 12 | Matt CeravoloLFWilson Magnet (Rochester) | 0.458 | 72 | 14 | 52 | 18 | 1 | 1 | 21 |
| 13 | Curtis BennettC, OFDansville | 0.446 | 65 | 20 | 56 | 8 | 0 | 1 | 21 |
| 14 | Luke Fairbrother1BHammondsport | 0.441 | 60 | 21 | 52 | 3 | 2 | 2 | 16 |
| 15 | Steve BartonCDansville | 0.434 | 83 | 23 | 69 | 13 | 1 | 0 | 21 |
| 16 | Daniel BanachRHP, 2BAvon | 0.432 | 81 | 25 | 71 | 7 | 0 | 3 | 21 |
| 17 | Chris Ripley1B, 3BNotre Dame (Batavia) | 0.429 | 91 | 31 | 82 | 7 | 1 | 1 | 26 |
| 18 | Thomas Wolcott2BAvon | 0.429 | 79 | 21 | 65 | 12 | 0 | 0 | 23 |
| 19 | Jake LawrenceOF, PDansville | 0.429 | 77 | 23 | 67 | 8 | 0 | 2 | 21 |
| 20 | Chris CavanaughSS, OFNotre Dame (Batavia) | 0.424 | 93 | 34 | 86 | 4 | 1 | 1 | 24 |
| 21 | Robert Scott1B, PWilson Magnet (Rochester) | 0.423 | 26 | 2 | 17 | 9 | 0 | 0 | 12 |
| 22 | Matt Phillips1BAvon | 0.422 | 83 | 24 | 71 | 11 | 1 | 0 | 21 |
| 23 | Patrick Hayes3B, CFAvon | 0.417 | 24 | 5 | 19 | 4 | 0 | 1 | 10 |
| 24 | Chris Hilkert3B, PWaterloo | 0.414 | 29 | 6 | 23 | 5 | 0 | 1 | 9 |
| 25 | John HouselRHP, 3BAvon | 0.413 | 63 | 16 | 53 | 9 | 0 | 1 | 18 |
| 26 | Garrett HoagP, INFDansville | 0.408 | 76 | 19 | 63 | 11 | 1 | 1 | 21 |
| 27 | Ashton JockRHP, 3BAvon | 0.408 | 71 | 20 | 60 | 8 | 2 | 1 | 20 |
| 28 | Delano TaylorC, 1BWilson Magnet (Rochester) | 0.400 | 55 | 14 | 46 | 8 | 1 | 0 | 19 |
| 29 | Kevin SesslerC, PWaterloo | 0.400 | 40 | 11 | 35 | 5 | 0 | 0 | 12 |
| 30 | Brian StachnikSS, PHammondsport | 0.400 | 40 | 6 | 29 | 9 | 1 | 1 | 11 |
| 31 | Norton SudaC, PWilson Magnet (Rochester) | 0.386 | 83 | 16 | 65 | 15 | 2 | 1 | 22 |
| 32 | Jeremy DobnerRF, 1BWilson Magnet (Rochester) | 0.384 | 73 | 15 | 60 | 12 | 0 | 1 | 20 |
| 33 | Joe PawlakOF, PNotre Dame (Batavia) | 0.381 | 66 | 12 | 51 | 9 | 0 | 3 | 26 |
| 34 | Desmond BrooksSS, 2BWilson Magnet (Rochester) | 0.380 | 92 | 18 | 75 | 17 | 0 | 0 | 22 |
| 35 | Bryan Jackson1B, PDansville | 0.380 | 80 | 16 | 65 | 10 | 0 | 4 | 21 |
| 36 | Kyle SchusterINF, PDansville | 0.380 | 71 | 20 | 64 | 7 | 0 | 0 | 20 |
| 37 | Cody FarrOFWaterloo | 0.379 | 29 | 5 | 23 | 6 | 0 | 0 | 12 |
| 38 | Ricci Wendlandt3B, CHammondsport | 0.377 | 61 | 18 | 55 | 5 | 1 | 0 | 16 |
| 39 | Greg BarrOFNotre Dame (Batavia) | 0.375 | 41 | 10 | 34 | 4 | 1 | 1 | 19 |
| 40 | Jordan YellsP, SSWaterloo | 0.375 | 40 | 9 | 34 | 6 | 0 | 0 | 12 |
| 41 | Luke LottesRFAvon | 0.372 | 43 | 7 | 33 | 9 | 1 | 0 | 22 |
| 42 | Rick LairC, PNotre Dame (Batavia) | 0.370 | 92 | 29 | 84 | 3 | 3 | 2 | 26 |
| 43 | Jake ClarksonP, OFHammondsport | 0.368 | 57 | 16 | 51 | 4 | 1 | 1 | 15 |
| 44 | Ryan HouseRF, PHammondsport | 0.368 | 38 | 11 | 34 | 3 | 1 | 0 | 12 |
| 45 | Garrett KeselRHP, SSAvon | 0.360 | 86 | 24 | 79 | 7 | 0 | 0 | 22 |
| 46 | Kevin SchildwasterCF, INFNotre Dame (Batavia) | 0.356 | 89 | 21 | 77 | 10 | 0 | 0 | 25 |
| 47 | Charlie PassarellCFAvon | 0.354 | 66 | 14 | 56 | 9 | 0 | 0 | 18 |
| 48 | Justin LathropOF, PDansville | 0.354 | 65 | 14 | 56 | 9 | 0 | 0 | 20 |
| 49 | Pat MancusoP, 1BNotre Dame (Batavia) | 0.352 | 91 | 18 | 77 | 14 | 0 | 0 | 26 |
| 50 | Henry Jones1B, PWilson Magnet (Rochester) | 0.348 | 89 | 23 | 80 | 7 | 1 | 1 | 22 |